The New Beetle has all of the downsides of being a post-1992 Volkswagen. Granted, they finally got most of the electrical issues worked out (the early New Beetles were notorious for that) but they are still rather overpriced, expensive to get fixed, and impossible to work on yourself. Even changing your own spark plugs is a bitch on teh newer VWs.
As for the Eclipse, they are a pale shadow of the first two generations when AWD was available and performance actually meant something. If I went Mitsubishi, it’d be a Lancer. The newer Eclipses are made for cruising the boulevard to pick up guys. They are not the sporty car that they once were even though they superficially look the part.
Of course, your tastes are bound to be different from mine. Personally, if I was going to go new then I would consider a Hyundai. However, if I were still back in NH where it snows like hell and I was still on a dirt road in the middle of the woods then I would go with @filmfann and go Subi; a bit pricey, but unlike a VW, they are actually worth every penny. My biggest knock against Subaru is the MPG rating; they tend to be heavy and the AWD system (the main reason they are so heavy; it adds a few hundred pounds) compounds it by adding driveline drag, which brings your MPG rating into the mid-20s; not worth it unless you actually need something to go through a winter wonderland like rural NH.
But what are you really looking for in a car anyways? I go for affordable, reliable, easy to work on, and good handling. That is why I like my old Corolla; $300, lasts forever, I can do almost anything to it myself for far less than a garage, and it can carve corners pretty damn well, so it suits my needs. The cramped back seat is a non-issue since I rarely use it for anything but a second trunk.